miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|60102372|gb|DN161611.1|DN161611 CGGGTGTACTGGGCGGCTTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGTTTCATAAAGAACGCT
GCTGCTGGTTACTATGCCAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGTTTGAGGGTCCAAT
TCTTCTGCCCCCGGAAGAGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTTGAGAAAAAGATTC
GCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAG
ACTGTGATGCGTGCAGATCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACAAGACATACACGCA
GGCTCTTCCATACTTTGACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTGGCTGTGGAGAAAC
TGCTCGGCCTGGAAGCTCCCATCAGGGCCAAGTACATCCGTACCATGTTTGCT




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  202 bits (515), Expect = 8e-52
 Identities = 93/138 (67%), Positives = 110/138 (79%)
 Frame = +3

Query: 117 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 296
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 297 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 476
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 477 KLLGLEAPIRAKYIRTMF 530
           KLL +  P RA++IR +F
Sbjct: 157 KLLNIRPPPRAQWIRVLF 174